Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795024.1_cds_XP_016442001.1_3644
CDS Infomation

[gene=LOC107767497] [db_xref=GeneID:107767497] [protein=polyvinylalcohol dehydrogenase-like isoform X2] [protein_id=XP_016442001.1] [location=join(17514..17561,18429..18931,19629..20247,20410..20865)] [gbkey=CDS]
Sequence

ATGGCTATCCATCTACGTTCCAACAATCTGTTTCTCCTTTTAGGATTGTGGCATAGTTAC
AGGACGCATTATCACAAGCAAGGAAATTGGATAAATCATGGTGGTGATTTGTACAATCGA
AGATACGCCTATGGTGAAAAGAAAATTAGCCGTTGGACTGCTTCAAGGCTGAAACAGAAG
TGGGAATTCAAAGCTGGAAAAGATATAACTGCGACGCCGGCAATATTCGACGGAGTTCTT
TATTTTCCGAGCTGGAATGGCAATATATATGCAGTGAGAGCTAAAGATGGAGTTCTTATA
TGGAAAAAAGGTTTGCCAGAATTGACTGGAATTAATGGAAAATTTAATGCTTCATCTTTG
CCTAATGTGACAACTATAGTTGCAAGAGCAACACCAACTGTTGTGAGTGATAAGGATATG
GTGATTGTTGGGGTTTATGGACCAAGTTTGGTTCTTGCTTTGAAAAGAAGTAGTGGAGAT
CTTATTTGGAGTACACAATTGGATGATCATCCTGCTAGTGTTGTTACCATGTCTGGAACA
TACTTCAAGGGGGCATTTTACATCGGAACTTCATCGCTAGAAGAAGGTGCTACAATTAAC
GAATGTTGCACCTTTCGCGGTAACTTTCTCAAGTTAGATGTCAAAACAGGCAAAATTCTA
TGGAAGACCTTCTTGCTGCCGGACAACGGCGGAAAACTCGGCAAATACGCCGGAGCTGCC
GTATGGGGAAGCAGCCCTTCCATCGATATCCGGCGGAACCACGTCTACATTGCCACCGGA
AACCTCTACTCCGTACCTAAACACATCGAGGAATGCCAAAAGGAGCAGAATCAACAAAAT
CAGACCAATCCGGATCCGACCCGACCCGACAAGTGCATTGAACCCGAGAACCACTCCGAC
TCGATGTTGTCCTTGGATTTGGATTCCGGAGAGATCAAATGGTACAAACAGCTTGGAGGA
TATGATGTGTGGTTCGTCGCATGCGGATTTAATTCGACGAACCCTAATTGCCCGATTGGC
CCGAGCCCTGATGCTGATTTTGGGGAAGCTCCGATGATGCTAAGCGTGCTTGCTAATGGA
ACGAAGAAACGAGACGTAGTAGCAGCTGTGCAGAAAAGTGGAATAGCATGGGCATTGGAT
CGCGATACTGGTGATATCTTCTGGACAACTGAAGCTGGTCCTGGAGGTACGGCAGGAGGA
GGTATATGGGGAGCAGCCACAGACACAAAGAGGGTATACACCAGCATTGTCAACAGTGAT
AACCTGAACTTCACATTAGTCCCATCCAAGAATGTGACCACAGGTGGAGCCTGGGTAGCA
ATGGATGCTAAAACTGGCAAAATCCTATGGACGACTGCAGTTCCAAACAAAGGTAAATCA
AACCCTGTAACTGTTGCCAATGGGGTGTTATTAGCAGGTTCACAAAATCCAACAGGTCCC
ATTTACGCCATTGACACAAAAACTGGGAAGATATTGTGGTCGAATGAGACTGGTGCAACT
GTGTTTGGGGGTATGTCAGTGAGCAATGGCTGCTTTTATGTAGGCAATGGTTACAGGTCT
GGAATAGGAGTCTTTAATCCTAACAACACTGGTGGAACATCACTCTTTGCCTACTGTGTA
TATTGA

Peptide Sequence

PEP ID

XP_016442001.1
PEP Infomation

PREDICTED: polyvinylalcohol dehydrogenase-like isoform X2 [Nicotiana tabacum]
Sequence

MAIHLRSNNLFLLLGLWHSYRTHYHKQGNWINHGGDLYNRRYAYGEKKISRWTASRLKQK
WEFKAGKDITATPAIFDGVLYFPSWNGNIYAVRAKDGVLIWKKGLPELTGINGKFNASSL
PNVTTIVARATPTVVSDKDMVIVGVYGPSLVLALKRSSGDLIWSTQLDDHPASVVTMSGT
YFKGAFYIGTSSLEEGATINECCTFRGNFLKLDVKTGKILWKTFLLPDNGGKLGKYAGAA
VWGSSPSIDIRRNHVYIATGNLYSVPKHIEECQKEQNQQNQTNPDPTRPDKCIEPENHSD
SMLSLDLDSGEIKWYKQLGGYDVWFVACGFNSTNPNCPIGPSPDADFGEAPMMLSVLANG
TKKRDVVAAVQKSGIAWALDRDTGDIFWTTEAGPGGTAGGGIWGAATDTKRVYTSIVNSD
NLNFTLVPSKNVTTGGAWVAMDAKTGKILWTTAVPNKGKSNPVTVANGVLLAGSQNPTGP
IYAIDTKTGKILWSNETGATVFGGMSVSNGCFYVGNGYRSGIGVFNPNNTGGTSLFAYCV
Y

Transcript Sequence

Gene sequence data has not been registered.